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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs72870399 chr2:154961610 G/A FNDC1 chr6:159590429-159693141:+ -0.46 -6.01 3.59E-9 Box Plot
THCA rs72871877 chr2:155012952 A/C FNDC1 chr6:159590429-159693141:+ -0.45 -5.92 6.19E-9 Box Plot
THCA rs7287310 chr22:24047092 T/C IGLL3 chr22:25713888-25716191:+ 0.55 8.4 5.16E-16 Box Plot
THCA rs7287369 chr22:24032015 A/C IGLL3 chr22:25713888-25716191:+ -0.65 -9.54 7.32E-20 Box Plot
THCA rs7288324 chr22:33136886 A/C ACO2 chr22:41865129-41924993:+ -0.34 -5.96 4.87E-9 Box Plot
THCA rs7288324 chr22:33136886 A/C ADSL chr22:40742504-40786467:+ -0.4 -6.34 5.35E-10 Box Plot
THCA rs7288324 chr22:33136886 A/C AP1B1 chr22:29723669-29819168:- -0.46 -6.6 1.12E-10 Box Plot
THCA rs7288324 chr22:33136886 A/C APOBEC3F chr22:39436609-39449915:+ -0.37 -6.31 6.33E-10 Box Plot
THCA rs7288324 chr22:33136886 A/C ARFGAP3 chr22:43192508-43254112:- -0.44 -6.68 6.46E-11 Box Plot
THCA rs7288324 chr22:33136886 A/C ASCC2 chr22:30184597-30234293:- -0.37 -5.93 5.97E-9 Box Plot
THCA rs7288324 chr22:33136886 A/C ATXN10 chr22:46067678-46241187:+ -0.45 -6.76 3.99E-11 Box Plot
THCA rs7288324 chr22:33136886 A/C BRD1 chr22:50166931-50221160:- -0.44 -7.02 7.42E-12 Box Plot
THCA rs7288324 chr22:33136886 A/C C22orf23 chr22:38339057-38349676:- -0.41 -6.48 2.28E-10 Box Plot
THCA rs7288324 chr22:33136886 A/C C22orf32 chr22:42475699-42480287:+ -0.35 -6.19 1.29E-9 Box Plot
THCA rs7288324 chr22:33136886 A/C C22orf40 chr22:46639911-46646193:- -0.38 -7.01 8.32E-12 Box Plot